sponge.function
API Name |
Description |
Supported Platforms |
Compute angle between two vectors. |
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Compute angle |
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Compute angle |
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Compute angle formed by three positions |
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Compute distance between position A and B without perodic bundary condition. |
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Compute distance between position |
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Compute distance between position |
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Compute torsion angle formed by two direction vectors |
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Compute torsion angle A-B-C-D formed by four positions |
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Compute torsion angle A-B-C-D formed by four positions |
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Compute torsion angle |
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Compute vector from initial point to terminal point without perodic bundary condition. |
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Compute vector from initial point to terminal point at perodic bundary condition. |
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Compute vector from initial point to terminal point. |
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convert energy according to difference units. |
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Energy. |
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Gather value from the last axis (axis=-1) of the tensor according to index. |
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Gather vector from the penultimate axis (axis=-2) of the tensor according to index. |
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get energy reference. |
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get the name of energy unit. |
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get energy unit. |
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get integer type of the input value |
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get length reference. |
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get name of length unit. |
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get length unit. |
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get ndarray type of the input value |
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The class to calculate distance with or without PBC box |
To Be Developed |
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Module for calculating B matrix whose dimensions are: C. |
To Be Developed |
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Module for calculating the differentiation of B matrix whose dimensions are: K*N*D. |
To Be Developed |
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The class to get vector with or without PBC box |
To Be Developed |
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convert length according to different units. |
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Length. |
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Reshape the pbc_box as the same ndim. |
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calculate the periodic image of the PBC box |
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set global length unit. |
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set global energy unit. |
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set global units. |
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Unit class to record and convert the length and energy units. |
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Make the value of vector |
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A class to generate velocities for atoms in system according to temperature |
To Be Developed |