restype_name_to_atom14_names
Atom types each amino acid contains. If there are fewer than 14, use empty type "''" to make up for it. The actual atoms are of the same type as residue_atoms .
key |
value |
---|---|
ALA |
['N', 'CA', 'C', 'O', 'CB', '', '', '', '', '', '', '', '', ''] |
ARG |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'CD', 'NE', 'CZ', 'NH1', 'NH2', '', '', ''] |
ASN |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'OD1', 'ND2', '', '', '', '', '', ''] |
ASP |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'OD1', 'OD2', '', '', '', '', '', ''] |
CYS |
['N', 'CA', 'C', 'O', 'CB', 'SG', '', '', '', '', '', '', '', ''] |
GLN |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'CD', 'OE1', 'NE2', '', '', '', '', ''] |
GLU |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'CD', 'OE1', 'OE2', '', '', '', '', ''] |
GLY |
['N', 'CA', 'C', 'O', '', '', '', '', '', '', '', '', '', ''] |
HIS |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'ND1', 'CD2', 'CE1', 'NE2', '', '', '', ''] |
ILE |
['N', 'CA', 'C', 'O', 'CB', 'CG1', 'CG2', 'CD1', '', '', '', '', '', ''] |
LEU |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'CD1', 'CD2', '', '', '', '', '', ''] |
LYS |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'CD', 'CE', 'NZ', '', '', '', '', ''] |
MET |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'CD', 'CE', 'NZ', '', '', '', '', ''] |
PHE |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'CD1', 'CD2', 'CE1', 'CE2', 'CZ', '', '', ''] |
PRO |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'CD', '', '', '', '', '', '', ''] |
SER |
['N', 'CA', 'C', 'O', 'CB', 'OG', '', '', '', '', '', '', '', ''] |
THR |
['N', 'CA', 'C', 'O', 'CB', 'OG', '', '', '', '', '', '', '', ''] |
TRP |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'CD1', 'CD2', 'NE1', 'CE2', 'CE3', 'CZ2', 'CZ3', 'CH2'] |
TYR |
['N', 'CA', 'C', 'O', 'CB', 'CG', 'CD1', 'CD2', 'CE1', 'CE2', 'CZ', 'OH', '', ''] |
VAL |
['N', 'CA', 'C', 'O', 'CB', 'CG1', 'CG2', '', '', '', '', '', '', ''] |
UNK |
['', '', '', '', '', '', '', '', '', '', '', '', '', ''] |